Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SFTPBP07988 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SFTPBP07988 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.2□□□□□ -0.14
SFTPBP07988 MED15P5-201ENST00000423150 992 ntBASIC14.2□□□□□ -0.14
SFTPBP07988 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 AC009947.1-201ENST00000444350 727 ntBASIC14.2□□□□□ -0.14
SFTPBP07988 RPS15P9-201ENST00000494093 319 ntBASIC14.2□□□□□ -0.14
SFTPBP07988 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 AC107918.2-201ENST00000530817 355 ntBASIC14.2□□□□□ -0.14
SFTPBP07988 AC091167.2-201ENST00000579581 588 ntBASIC14.2□□□□□ -0.14
SFTPBP07988 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
SFTPBP07988 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 MTHFR-217ENST00000641820 1569 ntBASIC14.2□□□□□ -0.14
SFTPBP07988 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPBP07988 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPBP07988 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SFTPBP07988 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SFTPBP07988 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPBP07988 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SFTPBP07988 AC007967.2-201ENST00000432613 625 ntBASIC14.19□□□□□ -0.14
SFTPBP07988 AC108751.1-201ENST00000490852 363 ntBASIC14.19□□□□□ -0.14
SFTPBP07988 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.19□□□□□ -0.14
SFTPBP07988 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPBP07988 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPBP07988 AC140113.2-201ENST00000604370 208 ntBASIC14.19□□□□□ -0.14
SFTPBP07988 AC027601.4-201ENST00000611259 610 ntBASIC14.19□□□□□ -0.14
SFTPBP07988 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 AC023511.2-201ENST00000618803 211 ntBASIC14.19□□□□□ -0.14
SFTPBP07988 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPBP07988 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPBP07988 PGM5P2-202ENST00000637225 1043 ntBASIC14.19□□□□□ -0.14
SFTPBP07988 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPBP07988 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms