Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RB1P06400 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.02■□□□□ 0.32
RB1P06400 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.02■□□□□ 0.32
RB1P06400 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.02■□□□□ 0.32
RB1P06400 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.02■□□□□ 0.31
RB1P06400 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.02■□□□□ 0.31
RB1P06400 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
RB1P06400 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
RB1P06400 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.02■□□□□ 0.31
RB1P06400 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RB1P06400 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.02■□□□□ 0.31
RB1P06400 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.02■□□□□ 0.31
RB1P06400 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.02■□□□□ 0.31
RB1P06400 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
RB1P06400 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.02■□□□□ 0.31
RB1P06400 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RB1P06400 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.01■□□□□ 0.31
RB1P06400 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 INTS4P2-202ENST00000614726 2019 ntBASIC17.01■□□□□ 0.31
RB1P06400 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 BAATP1-201ENST00000412284 1225 ntBASIC17.01■□□□□ 0.31
RB1P06400 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.01■□□□□ 0.31
RB1P06400 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.01■□□□□ 0.31
RB1P06400 YBX1P6-201ENST00000442962 1002 ntBASIC17.01■□□□□ 0.31
RB1P06400 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.01■□□□□ 0.31
RB1P06400 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RB1P06400 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.01■□□□□ 0.31
RB1P06400 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RB1P06400 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RB1P06400 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RB1P06400 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RB1P06400 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17■□□□□ 0.31
RB1P06400 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RB1P06400 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17■□□□□ 0.31
RB1P06400 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17■□□□□ 0.31
RB1P06400 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RB1P06400 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17■□□□□ 0.31
RB1P06400 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17■□□□□ 0.31
RB1P06400 AC016694.1-201ENST00000434179 700 ntBASIC17■□□□□ 0.31
RB1P06400 TARDBPP1-201ENST00000442013 1203 ntBASIC17■□□□□ 0.31
RB1P06400 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17■□□□□ 0.31
RB1P06400 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17■□□□□ 0.31
RB1P06400 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17■□□□□ 0.31
RB1P06400 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RB1P06400 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17■□□□□ 0.31
RB1P06400 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17■□□□□ 0.31
RB1P06400 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17■□□□□ 0.31
RB1P06400 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17■□□□□ 0.31
RB1P06400 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17■□□□□ 0.31
RB1P06400 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RB1P06400 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RB1P06400 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RB1P06400 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms