Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBB4AP04350 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.44■□□□□ 0.38
TUBB4AP04350 AC112907.2-201ENST00000448639 330 ntBASIC17.44■□□□□ 0.38
TUBB4AP04350 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.44■□□□□ 0.38
TUBB4AP04350 AC087641.1-201ENST00000557561 1021 ntBASIC17.44■□□□□ 0.38
TUBB4AP04350 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.44■□□□□ 0.38
TUBB4AP04350 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.44■□□□□ 0.38
TUBB4AP04350 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.44■□□□□ 0.38
TUBB4AP04350 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBB4AP04350 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
TUBB4AP04350 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TUBB4AP04350 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 FGD5P1-202ENST00000614866 2498 ntBASIC17.44■□□□□ 0.38
TUBB4AP04350 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBB4AP04350 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBB4AP04350 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 KRT8P44-201ENST00000441609 1350 ntBASIC17.43■□□□□ 0.38
TUBB4AP04350 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.43■□□□□ 0.38
TUBB4AP04350 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 BX664615.1-201ENST00000443558 458 ntBASIC17.43■□□□□ 0.38
TUBB4AP04350 PRYP5-201ENST00000451909 266 ntBASIC17.43■□□□□ 0.38
TUBB4AP04350 AC245100.5-201ENST00000452108 331 ntBASIC17.43■□□□□ 0.38
TUBB4AP04350 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.43■□□□□ 0.38
TUBB4AP04350 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.43■□□□□ 0.38
TUBB4AP04350 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.43■□□□□ 0.38
TUBB4AP04350 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TUBB4AP04350 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TUBB4AP04350 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
TUBB4AP04350 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBB4AP04350 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TUBB4AP04350 OR2I1P-209ENST00000641730 5365 ntBASIC17.42■□□□□ 0.38
TUBB4AP04350 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBB4AP04350 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TUBB4AP04350 YBX1P2-201ENST00000489612 999 ntBASIC17.42■□□□□ 0.38
TUBB4AP04350 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBB4AP04350 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBB4AP04350 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBB4AP04350 AF228730.7-201ENST00000641842 219 ntBASIC17.42■□□□□ 0.38
TUBB4AP04350 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBB4AP04350 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB4AP04350 SLC22A20-204ENST00000530038 1673 ntBASIC17.42■□□□□ 0.38
TUBB4AP04350 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBB4AP04350 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms