Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A1P00352 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A1P00352 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.27■□□□□ 0.52
ALDH1A1P00352 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A1P00352 HOMER2P2-201ENST00000451621 847 ntBASIC18.27■□□□□ 0.52
ALDH1A1P00352 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A1P00352 MIR4741-201ENST00000579822 90 ntBASIC18.27■□□□□ 0.52
ALDH1A1P00352 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A1P00352 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ALDH1A1P00352 AC132938.4-201ENST00000623835 848 ntBASIC18.27■□□□□ 0.52
ALDH1A1P00352 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A1P00352 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ALDH1A1P00352 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
ALDH1A1P00352 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
ALDH1A1P00352 AC015818.8-201ENST00000587907 1519 ntBASIC18.27■□□□□ 0.51
ALDH1A1P00352 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A1P00352 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A1P00352 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A1P00352 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A1P00352 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 PKD1P1-201ENST00000458669 6805 ntBASIC18.26■□□□□ 0.51
ALDH1A1P00352 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 TMEM198B-204ENST00000484016 896 ntBASIC18.26■□□□□ 0.51
ALDH1A1P00352 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 MIR4706-201ENST00000582134 82 ntBASIC18.26■□□□□ 0.51
ALDH1A1P00352 EEF1DP1-201ENST00000585891 896 ntBASIC18.26■□□□□ 0.51
ALDH1A1P00352 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 AC138627.1-207ENST00000641560 1006 ntBASIC18.26■□□□□ 0.51
ALDH1A1P00352 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 AL645728.1-201ENST00000366221 2101 ntBASIC18.26■□□□□ 0.51
ALDH1A1P00352 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALDH1A1P00352 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ALDH1A1P00352 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.25■□□□□ 0.51
ALDH1A1P00352 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 FAM197Y7-201ENST00000432892 766 ntBASIC18.25■□□□□ 0.51
ALDH1A1P00352 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ALDH1A1P00352 AC078819.1-201ENST00000547454 765 ntBASIC18.25■□□□□ 0.51
ALDH1A1P00352 AC012085.1-201ENST00000548270 765 ntBASIC18.25■□□□□ 0.51
ALDH1A1P00352 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.25■□□□□ 0.51
ALDH1A1P00352 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.25■□□□□ 0.51
ALDH1A1P00352 AC000095.1-201ENST00000603208 874 ntBASIC18.25■□□□□ 0.51
ALDH1A1P00352 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms