Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPNE6O95741 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE6O95741 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
CPNE6O95741 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE6O95741 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE6O95741 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CPNE6O95741 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.96■□□□□ 0.15
CPNE6O95741 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE6O95741 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE6O95741 AC002472.2-201ENST00000442739 958 ntBASIC15.96■□□□□ 0.15
CPNE6O95741 FAM207CP-201ENST00000443486 507 ntBASIC15.96■□□□□ 0.15
CPNE6O95741 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.96■□□□□ 0.15
CPNE6O95741 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.96■□□□□ 0.15
CPNE6O95741 RN7SL204P-201ENST00000582831 262 ntBASIC15.96■□□□□ 0.15
CPNE6O95741 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE6O95741 AC013467.2-201ENST00000605472 835 ntBASIC15.96■□□□□ 0.15
CPNE6O95741 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CPNE6O95741 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.96■□□□□ 0.15
CPNE6O95741 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE6O95741 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CPNE6O95741 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.96■□□□□ 0.14
CPNE6O95741 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE6O95741 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE6O95741 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE6O95741 AP3S2-216ENST00000617003 1561 ntBASIC15.96■□□□□ 0.14
CPNE6O95741 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE6O95741 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CPNE6O95741 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.95■□□□□ 0.14
CPNE6O95741 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CPNE6O95741 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE6O95741 AC006277.1-201ENST00000624348 1610 ntBASIC15.95■□□□□ 0.14
CPNE6O95741 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE6O95741 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CPNE6O95741 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.95■□□□□ 0.14
CPNE6O95741 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 AC241585.1-201ENST00000433527 519 ntBASIC15.95■□□□□ 0.14
CPNE6O95741 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE6O95741 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.95■□□□□ 0.14
CPNE6O95741 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE6O95741 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.95■□□□□ 0.14
CPNE6O95741 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.95■□□□□ 0.14
CPNE6O95741 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE6O95741 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE6O95741 AC003101.2-201ENST00000612557 442 ntBASIC15.95■□□□□ 0.14
CPNE6O95741 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CPNE6O95741 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.95■□□□□ 0.14
CPNE6O95741 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE6O95741 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE6O95741 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE6O95741 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE6O95741 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CPNE6O95741 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE6O95741 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CPNE6O95741 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE6O95741 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE6O95741 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE6O95741 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE6O95741 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE6O95741 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE6O95741 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE6O95741 AL136379.1-201ENST00000623471 2642 ntBASIC15.94■□□□□ 0.14
CPNE6O95741 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms