Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC092068.3-201ENST00000587894 2016 ntBASIC13.64□□□□□ -0.23
ABCA1O95477 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCA1O95477 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 ZNF890P-202ENST00000530367 1156 ntBASIC13.64□□□□□ -0.23
ABCA1O95477 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 CETN4P-206ENST00000642099 2168 ntBASIC13.64□□□□□ -0.23
ABCA1O95477 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 AC106886.4-201ENST00000623557 2502 ntBASIC13.64□□□□□ -0.23
ABCA1O95477 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.64□□□□□ -0.23
ABCA1O95477 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.64□□□□□ -0.23
ABCA1O95477 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ABCA1O95477 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.64□□□□□ -0.23
ABCA1O95477 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCA1O95477 AC008494.3-201ENST00000606615 944 ntBASIC13.64□□□□□ -0.23
ABCA1O95477 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCA1O95477 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ABCA1O95477 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ABCA1O95477 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ABCA1O95477 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 AL021920.2-201ENST00000624828 1351 ntBASIC13.63□□□□□ -0.23
ABCA1O95477 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ABCA1O95477 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.63□□□□□ -0.23
ABCA1O95477 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.63□□□□□ -0.23
ABCA1O95477 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ABCA1O95477 CYP2A7P1-201ENST00000595391 815 ntBASIC13.63□□□□□ -0.23
ABCA1O95477 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.63□□□□□ -0.23
ABCA1O95477 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.63□□□□□ -0.23
ABCA1O95477 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 PRORSD1P-202ENST00000563365 2154 ntBASIC13.63□□□□□ -0.23
ABCA1O95477 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ABCA1O95477 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ABCA1O95477 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.63□□□□□ -0.23
ABCA1O95477 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCA1O95477 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCA1O95477 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCA1O95477 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCA1O95477 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ABCA1O95477 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ABCA1O95477 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.62□□□□□ -0.23
ABCA1O95477 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.62□□□□□ -0.23
ABCA1O95477 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
ABCA1O95477 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCA1O95477 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ABCA1O95477 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.62□□□□□ -0.23
ABCA1O95477 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.62□□□□□ -0.23
ABCA1O95477 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.62□□□□□ -0.23
ABCA1O95477 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.62□□□□□ -0.23
ABCA1O95477 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms