Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 AL355334.1-201ENST00000417713 215 ntBASIC23.85■■□□□ 1.41
RAPGEF3O95398 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 AC008267.1-201ENST00000474858 1069 ntBASIC23.85■■□□□ 1.41
RAPGEF3O95398 AC044849.1-201ENST00000519737 1188 ntBASIC23.85■■□□□ 1.41
RAPGEF3O95398 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 ETV2-208ENST00000621247 941 ntTSL 5 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF3O95398 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF3O95398 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF3O95398 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF3O95398 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 SDHD-202ENST00000525291 790 ntTSL 3 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 AL133499.1-201ENST00000596207 608 ntBASIC23.84■■□□□ 1.41
RAPGEF3O95398 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 AP005019.2-201ENST00000615104 511 ntBASIC23.84■■□□□ 1.41
RAPGEF3O95398 AC079336.7-201ENST00000623428 1078 ntBASIC23.84■■□□□ 1.41
RAPGEF3O95398 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 GCK-202ENST00000345378 2421 ntTSL 2 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF3O95398 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC23.84■■□□□ 1.41
RAPGEF3O95398 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF3O95398 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF3O95398 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF3O95398 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF3O95398 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 PRKXP1-201ENST00000561423 1122 ntBASIC23.83■■□□□ 1.41
RAPGEF3O95398 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF3O95398 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF3O95398 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC23.83■■□□□ 1.41
RAPGEF3O95398 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RAPGEF3O95398 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RAPGEF3O95398 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 MAGEA5-201ENST00000446757 942 ntBASIC23.82■■□□□ 1.4
RAPGEF3O95398 AL133466.1-201ENST00000447582 150 ntBASIC23.82■■□□□ 1.4
RAPGEF3O95398 COX5BP1-201ENST00000507622 393 ntBASIC23.82■■□□□ 1.4
RAPGEF3O95398 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
RAPGEF3O95398 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF3O95398 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 TP73-209ENST00000603362 1668 ntTSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms