Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX2-2O95096 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-2O95096 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-2O95096 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NKX2-2O95096 AC254562.1-201ENST00000417586 456 ntBASIC14.95□□□□□ -0.02
NKX2-2O95096 RPS8P6-201ENST00000426177 609 ntBASIC14.95□□□□□ -0.02
NKX2-2O95096 AP006288.1-201ENST00000446065 395 ntBASIC14.95□□□□□ -0.02
NKX2-2O95096 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 ALG1L8P-201ENST00000533887 760 ntBASIC14.95□□□□□ -0.02
NKX2-2O95096 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.95□□□□□ -0.02
NKX2-2O95096 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.95□□□□□ -0.02
NKX2-2O95096 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-2O95096 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
NKX2-2O95096 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NKX2-2O95096 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NKX2-2O95096 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-2O95096 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
NKX2-2O95096 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-2O95096 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-2O95096 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NKX2-2O95096 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
NKX2-2O95096 GPS2P2-201ENST00000430745 888 ntBASIC14.94□□□□□ -0.02
NKX2-2O95096 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX2-2O95096 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX2-2O95096 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX2-2O95096 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX2-2O95096 AC009093.7-201ENST00000623853 1223 ntBASIC14.94□□□□□ -0.02
NKX2-2O95096 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.94□□□□□ -0.02
NKX2-2O95096 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 AC134407.2-201ENST00000625089 1978 ntBASIC14.94□□□□□ -0.02
NKX2-2O95096 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
NKX2-2O95096 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-2O95096 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-2O95096 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-2O95096 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-2O95096 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NKX2-2O95096 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX2-2O95096 KRT18P13-201ENST00000400056 1290 ntBASIC14.93□□□□□ -0.02
NKX2-2O95096 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 AL139010.1-201ENST00000454878 894 ntBASIC14.93□□□□□ -0.02
NKX2-2O95096 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX2-2O95096 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX2-2O95096 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
NKX2-2O95096 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms