Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.05■□□□□ 0.48
CLSTN1O94985 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.05■□□□□ 0.48
CLSTN1O94985 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.05■□□□□ 0.48
CLSTN1O94985 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.05■□□□□ 0.48
CLSTN1O94985 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.05■□□□□ 0.48
CLSTN1O94985 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.05■□□□□ 0.48
CLSTN1O94985 AC092865.5-201ENST00000545435 363 ntBASIC18.05■□□□□ 0.48
CLSTN1O94985 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
CLSTN1O94985 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.05■□□□□ 0.48
CLSTN1O94985 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.05■□□□□ 0.48
CLSTN1O94985 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.05■□□□□ 0.48
CLSTN1O94985 AL645728.2-201ENST00000641974 660 ntBASIC18.05■□□□□ 0.48
CLSTN1O94985 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLSTN1O94985 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 LINC00895-201ENST00000629028 1637 ntBASIC18.05■□□□□ 0.48
CLSTN1O94985 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.04■□□□□ 0.48
CLSTN1O94985 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.04■□□□□ 0.48
CLSTN1O94985 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLSTN1O94985 AL596257.1-201ENST00000641463 2694 ntBASIC18.04■□□□□ 0.48
CLSTN1O94985 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.04■□□□□ 0.48
CLSTN1O94985 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.04■□□□□ 0.48
CLSTN1O94985 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.04■□□□□ 0.48
CLSTN1O94985 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
CLSTN1O94985 AC068137.2-201ENST00000605408 478 ntBASIC18.04■□□□□ 0.48
CLSTN1O94985 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.04■□□□□ 0.48
CLSTN1O94985 AC092865.6-201ENST00000642101 219 ntBASIC18.04■□□□□ 0.48
CLSTN1O94985 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.04■□□□□ 0.48
CLSTN1O94985 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.04■□□□□ 0.48
CLSTN1O94985 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLSTN1O94985 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLSTN1O94985 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLSTN1O94985 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.03■□□□□ 0.48
CLSTN1O94985 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.03■□□□□ 0.48
CLSTN1O94985 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.03■□□□□ 0.48
CLSTN1O94985 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.03■□□□□ 0.48
CLSTN1O94985 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLSTN1O94985 AL031055.1-201ENST00000606362 631 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms