Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFS3O75489 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.21■□□□□ 0.19
NDUFS3O75489 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NDUFS3O75489 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.21■□□□□ 0.19
NDUFS3O75489 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.21■□□□□ 0.19
NDUFS3O75489 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 AC004832.2-201ENST00000426397 482 ntBASIC16.21■□□□□ 0.19
NDUFS3O75489 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.21■□□□□ 0.19
NDUFS3O75489 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 MTDHP5-201ENST00000598980 586 ntBASIC16.21■□□□□ 0.19
NDUFS3O75489 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 AC092902.6-201ENST00000641783 218 ntBASIC16.21■□□□□ 0.19
NDUFS3O75489 AL365203.3-201ENST00000609742 2057 ntBASIC16.21■□□□□ 0.19
NDUFS3O75489 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NDUFS3O75489 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS3O75489 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS3O75489 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NDUFS3O75489 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFS3O75489 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFS3O75489 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFS3O75489 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NDUFS3O75489 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
NDUFS3O75489 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFS3O75489 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
NDUFS3O75489 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.21■□□□□ 0.18
NDUFS3O75489 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFS3O75489 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
NDUFS3O75489 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
NDUFS3O75489 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.2■□□□□ 0.18
NDUFS3O75489 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
NDUFS3O75489 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.2■□□□□ 0.18
NDUFS3O75489 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 YBX2P1-201ENST00000394192 760 ntBASIC16.2■□□□□ 0.18
NDUFS3O75489 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.2■□□□□ 0.18
NDUFS3O75489 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.2■□□□□ 0.18
NDUFS3O75489 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 AL135744.1-201ENST00000565098 629 ntBASIC16.2■□□□□ 0.18
NDUFS3O75489 AL138918.1-201ENST00000568306 659 ntBASIC16.2■□□□□ 0.18
NDUFS3O75489 C20orf181-201ENST00000623918 480 ntBASIC16.2■□□□□ 0.18
NDUFS3O75489 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NDUFS3O75489 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NDUFS3O75489 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NDUFS3O75489 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 AC010491.1-201ENST00000563101 2797 ntBASIC16.2■□□□□ 0.18
NDUFS3O75489 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NDUFS3O75489 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFS3O75489 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NDUFS3O75489 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NDUFS3O75489 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NDUFS3O75489 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFS3O75489 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NDUFS3O75489 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
NDUFS3O75489 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms