Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.54■□□□□ 0.08
GFRA3O60609 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.54■□□□□ 0.08
GFRA3O60609 AZGP1P1-201ENST00000411909 902 ntBASIC15.54■□□□□ 0.08
GFRA3O60609 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.54■□□□□ 0.08
GFRA3O60609 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.54■□□□□ 0.08
GFRA3O60609 AL161670.2-201ENST00000557650 1227 ntBASIC15.54■□□□□ 0.08
GFRA3O60609 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.54■□□□□ 0.08
GFRA3O60609 MIR3908-201ENST00000579798 126 ntBASIC15.54■□□□□ 0.08
GFRA3O60609 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.54■□□□□ 0.08
GFRA3O60609 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
GFRA3O60609 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.54■□□□□ 0.08
GFRA3O60609 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.54■□□□□ 0.08
GFRA3O60609 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 LINC00304-203ENST00000565008 1864 ntBASIC15.54■□□□□ 0.08
GFRA3O60609 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.54■□□□□ 0.08
GFRA3O60609 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GFRA3O60609 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
GFRA3O60609 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GFRA3O60609 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.53■□□□□ 0.08
GFRA3O60609 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
GFRA3O60609 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
GFRA3O60609 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.53■□□□□ 0.08
GFRA3O60609 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
GFRA3O60609 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GFRA3O60609 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 AC026316.1-201ENST00000398900 414 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.53■□□□□ 0.08
GFRA3O60609 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 ACTG1P2-201ENST00000415776 1125 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.53■□□□□ 0.08
GFRA3O60609 ACTG1P11-201ENST00000425411 1125 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 KRT18P25-201ENST00000508931 1278 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 AC022217.1-201ENST00000521069 738 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.53■□□□□ 0.08
GFRA3O60609 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.53■□□□□ 0.08
GFRA3O60609 AC103691.2-201ENST00000618824 433 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
GFRA3O60609 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.53■□□□□ 0.08
GFRA3O60609 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
GFRA3O60609 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GFRA3O60609 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.53■□□□□ 0.08
GFRA3O60609 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GFRA3O60609 AL354989.2-201ENST00000435838 1540 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 FRMD8P1-201ENST00000440433 1524 ntBASIC15.53■□□□□ 0.08
GFRA3O60609 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.52■□□□□ 0.08
GFRA3O60609 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.52■□□□□ 0.08
GFRA3O60609 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
GFRA3O60609 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GFRA3O60609 CD8B2-202ENST00000417670 633 ntBASIC15.52■□□□□ 0.08
GFRA3O60609 AC079178.1-201ENST00000420915 656 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms