Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 RNA5SP419-201ENST00000515908 135 ntBASIC14.45□□□□□ -0.1
GMDSO60547 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.45□□□□□ -0.1
GMDSO60547 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 MPDU1-223ENST00000582151 728 ntBASIC14.45□□□□□ -0.1
GMDSO60547 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.45□□□□□ -0.1
GMDSO60547 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.45□□□□□ -0.1
GMDSO60547 REXO1L3P-201ENST00000622202 1288 ntBASIC14.45□□□□□ -0.1
GMDSO60547 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 AC116407.3-201ENST00000623905 1129 ntBASIC14.45□□□□□ -0.1
GMDSO60547 AC117500.6-201ENST00000624871 588 ntBASIC14.45□□□□□ -0.1
GMDSO60547 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.45□□□□□ -0.1
GMDSO60547 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.44□□□□□ -0.1
GMDSO60547 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
GMDSO60547 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GMDSO60547 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
GMDSO60547 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.44□□□□□ -0.1
GMDSO60547 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
GMDSO60547 PRSS29P-201ENST00000440800 595 ntBASIC14.44□□□□□ -0.1
GMDSO60547 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 SLC25A6P2-201ENST00000497974 877 ntBASIC14.44□□□□□ -0.1
GMDSO60547 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GMDSO60547 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.44□□□□□ -0.1
GMDSO60547 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.44□□□□□ -0.1
GMDSO60547 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.44□□□□□ -0.1
GMDSO60547 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.44□□□□□ -0.1
GMDSO60547 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
GMDSO60547 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.44□□□□□ -0.1
GMDSO60547 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GMDSO60547 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.44□□□□□ -0.1
GMDSO60547 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.43□□□□□ -0.1
GMDSO60547 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
GMDSO60547 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 CICP13-201ENST00000422015 2789 ntBASIC14.43□□□□□ -0.1
GMDSO60547 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GMDSO60547 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 AC098831.1-202ENST00000438821 336 ntBASIC14.43□□□□□ -0.1
GMDSO60547 AC108073.2-201ENST00000464002 357 ntBASIC14.43□□□□□ -0.1
GMDSO60547 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.43□□□□□ -0.1
GMDSO60547 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.43□□□□□ -0.1
GMDSO60547 AC091167.2-201ENST00000579581 588 ntBASIC14.43□□□□□ -0.1
GMDSO60547 MIR4492-201ENST00000581627 80 ntBASIC14.43□□□□□ -0.1
GMDSO60547 AL049840.3-201ENST00000602669 611 ntBASIC14.43□□□□□ -0.1
GMDSO60547 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms