Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LDB2O43679 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LDB2O43679 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB2O43679 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB2O43679 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
LDB2O43679 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB2O43679 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 AC211486.1-202ENST00000416371 468 ntBASIC16.2■□□□□ 0.18
LDB2O43679 AL627223.1-201ENST00000416693 442 ntBASIC16.2■□□□□ 0.18
LDB2O43679 AC005237.2-201ENST00000434368 219 ntBASIC16.2■□□□□ 0.18
LDB2O43679 AC004967.1-201ENST00000453589 447 ntBASIC16.2■□□□□ 0.18
LDB2O43679 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB2O43679 AC211476.1-201ENST00000503899 468 ntBASIC16.2■□□□□ 0.18
LDB2O43679 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB2O43679 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.2■□□□□ 0.18
LDB2O43679 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
LDB2O43679 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB2O43679 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB2O43679 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LDB2O43679 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB2O43679 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB2O43679 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LDB2O43679 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 AC132872.4-202ENST00000622924 2756 ntBASIC16.19■□□□□ 0.18
LDB2O43679 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 AC134407.2-201ENST00000625089 1978 ntBASIC16.19■□□□□ 0.18
LDB2O43679 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 AP001282.1-201ENST00000531301 1499 ntBASIC16.19■□□□□ 0.18
LDB2O43679 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LDB2O43679 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
LDB2O43679 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.19■□□□□ 0.18
LDB2O43679 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 AC134684.3-201ENST00000641758 218 ntBASIC16.19■□□□□ 0.18
LDB2O43679 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB2O43679 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB2O43679 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB2O43679 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB2O43679 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB2O43679 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB2O43679 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB2O43679 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB2O43679 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB2O43679 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB2O43679 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB2O43679 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LDB2O43679 AC011477.6-201ENST00000604980 1927 ntBASIC16.18■□□□□ 0.18
LDB2O43679 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
LDB2O43679 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB2O43679 GPS2P2-201ENST00000430745 888 ntBASIC16.18■□□□□ 0.18
LDB2O43679 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.18■□□□□ 0.18
LDB2O43679 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB2O43679 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB2O43679 RARRES2P9-201ENST00000565168 469 ntBASIC16.18■□□□□ 0.18
LDB2O43679 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB2O43679 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
LDB2O43679 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB2O43679 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LDB2O43679 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms