Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLIC1O00299 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.33■□□□□ 0.05
CLIC1O00299 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLIC1O00299 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLIC1O00299 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.33■□□□□ 0.05
CLIC1O00299 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLIC1O00299 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 KRT18P56-201ENST00000507275 550 ntBASIC15.33■□□□□ 0.04
CLIC1O00299 AP002469.2-201ENST00000531724 424 ntBASIC15.33■□□□□ 0.04
CLIC1O00299 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.33■□□□□ 0.04
CLIC1O00299 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLIC1O00299 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
CLIC1O00299 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLIC1O00299 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.32■□□□□ 0.04
CLIC1O00299 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.32■□□□□ 0.04
CLIC1O00299 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLIC1O00299 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.32■□□□□ 0.04
CLIC1O00299 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.32■□□□□ 0.04
CLIC1O00299 VN2R19P-201ENST00000442399 1052 ntBASIC15.32■□□□□ 0.04
CLIC1O00299 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.32■□□□□ 0.04
CLIC1O00299 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLIC1O00299 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.32■□□□□ 0.04
CLIC1O00299 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 AC067930.6-201ENST00000623257 4947 ntBASIC15.32■□□□□ 0.04
CLIC1O00299 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC1O00299 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLIC1O00299 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC1O00299 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC1O00299 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLIC1O00299 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms