Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.07■□□□□ 0.16
TLR4O00206 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.07■□□□□ 0.16
TLR4O00206 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TLR4O00206 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TLR4O00206 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.07■□□□□ 0.16
TLR4O00206 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TLR4O00206 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.06■□□□□ 0.16
TLR4O00206 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TLR4O00206 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.06■□□□□ 0.16
TLR4O00206 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.06■□□□□ 0.16
TLR4O00206 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 KRT8P12-202ENST00000472924 1397 ntBASIC16.06■□□□□ 0.16
TLR4O00206 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 OR8S1-201ENST00000310194 1080 ntBASIC16.06■□□□□ 0.16
TLR4O00206 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 DFFBP1-201ENST00000433250 979 ntBASIC16.06■□□□□ 0.16
TLR4O00206 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.06■□□□□ 0.16
TLR4O00206 AC104794.3-201ENST00000566840 1248 ntBASIC16.06■□□□□ 0.16
TLR4O00206 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.06■□□□□ 0.16
TLR4O00206 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
TLR4O00206 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TLR4O00206 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.06■□□□□ 0.16
TLR4O00206 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.05■□□□□ 0.16
TLR4O00206 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TLR4O00206 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 AL391825.1-201ENST00000457671 1364 ntBASIC16.05■□□□□ 0.16
TLR4O00206 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.05■□□□□ 0.16
TLR4O00206 AC087499.6-201ENST00000411576 835 ntBASIC16.05■□□□□ 0.16
TLR4O00206 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
TLR4O00206 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 DOC2GP-202ENST00000514950 1163 ntBASIC16.05■□□□□ 0.16
TLR4O00206 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.05■□□□□ 0.16
TLR4O00206 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.05■□□□□ 0.16
TLR4O00206 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TLR4O00206 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.05■□□□□ 0.16
TLR4O00206 AC044860.1-202ENST00000559481 777 ntBASIC16.05■□□□□ 0.16
TLR4O00206 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TLR4O00206 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
TLR4O00206 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.05■□□□□ 0.16
TLR4O00206 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TLR4O00206 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TLR4O00206 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms