Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 HILS1-202ENST00000545329 423 ntBASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 AL450472.2-201ENST00000603663 1156 ntBASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC144AA2RUR9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 MIR648-201ENST00000385046 94 ntBASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 AC092552.1-201ENST00000547243 906 ntBASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 RPSAP52-203ENST00000622976 1023 ntBASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC144AA2RUR9 NKILA-202ENST00000614771 2598 ntBASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 PHKG1P2-201ENST00000457537 863 ntBASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC144AA2RUR9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms