Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 AC138035.3-201ENST00000622706 2791 ntBASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 AC021097.1-201ENST00000607902 574 ntBASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 AP001269.4-201ENST00000609611 512 ntBASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 GGTLC5P-201ENST00000617623 998 ntBASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 SBF1P1-201ENST00000444527 5631 ntBASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 PCDHA3-202ENST00000532566 4594 ntBASIC13.29□□□□□ -0.28
DUXBA0A1W2PPF3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 KRT16P4-201ENST00000453883 522 ntBASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 AC093827.2-201ENST00000512654 315 ntBASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 NKAPP1-205ENST00000585790 367 ntBASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 AL365330.1-201ENST00000607459 531 ntBASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
DUXBA0A1W2PPF3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms