Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC004449.1-201ENST00000564240 433 ntBASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC093028.1-201ENST00000622998 982 ntBASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 METTL21AP1-201ENST00000438852 635 ntBASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 OR6D1P-203ENST00000641209 4860 ntBASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 TUBB3P1-201ENST00000405796 1332 ntBASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRBV5-4A0A0C4DH59 KRT8P12-202ENST00000472924 1397 ntBASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV5-4A0A0C4DH59 HIST3H2BA-201ENST00000436555 524 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms