Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 KRT18P3-201ENST00000451602 1288 ntBASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 AC132872.1-201ENST00000566986 1195 ntBASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 AC068137.2-201ENST00000605408 478 ntBASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 AC092919.2-201ENST00000623631 1645 ntBASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 NFIC-211ENST00000641145 8399 ntBASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 AC144831.1-201ENST00000573312 2656 ntBASIC15.81■□□□□ 0.12
PCDHGA11Q9Y5H2 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 DBET-201ENST00000630918 3363 ntBASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 AC002056.1-201ENST00000395613 760 ntBASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 MED15P5-201ENST00000423150 992 ntBASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 SLC25A1P1-201ENST00000528351 927 ntBASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 AC140113.2-201ENST00000604370 208 ntBASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms