Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 KRT89P-201ENST00000620027 1478 ntBASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 AC006277.1-201ENST00000624348 1610 ntBASIC15.52■□□□□ 0.08
LRCH1Q9Y2L9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.52■□□□□ 0.07
LRCH1Q9Y2L9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 MYO15B-237ENST00000642007 4893 ntBASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AC010460.3-201ENST00000511359 1579 ntBASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AL671277.2-201ENST00000458060 996 ntBASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.51■□□□□ 0.07
LRCH1Q9Y2L9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms