Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 CYP2T1P-202ENST00000641596 2535 ntBASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 SPTSSB-204ENST00000617024 1292 ntBASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 HLA-V-204ENST00000476601 1289 ntBASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 AC013467.2-201ENST00000605472 835 ntBASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 AC009118.2-201ENST00000613275 655 ntBASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC6Q9UBN7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 FAM220BP-201ENST00000377689 816 ntBASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms