Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 AL844908.2-201ENST00000609461 460 ntBASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 KRT8P12-202ENST00000472924 1397 ntBASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CPNE7Q9UBL6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 SPDYE17-201ENST00000412399 783 ntBASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 AC009118.2-201ENST00000613275 655 ntBASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE7Q9UBL6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 SERBP1P3-201ENST00000459980 809 ntBASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 RN7SL618P-201ENST00000477850 296 ntBASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 AC009407.1-201ENST00000568958 598 ntBASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms