Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 CROCCP1-201ENST00000426910 5675 ntBASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 KRT17P7-201ENST00000451704 1104 ntBASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 AL109936.8-201ENST00000641772 604 ntBASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT1Q9P2V4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LRIT1Q9P2V4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 POU5F1P6-201ENST00000466990 990 ntBASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 AC093004.1-201ENST00000508850 424 ntBASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 SPDYE18-201ENST00000510091 1050 ntBASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 AC004461.2-201ENST00000629517 803 ntBASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRIT1Q9P2V4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 AL136982.4-201ENST00000437689 1740 ntBASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRIT1Q9P2V4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms