Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.25■□□□□ 0.03
CNIH4Q9P003 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH4Q9P003 AC024909.3-201ENST00000611513 2257 ntBASIC15.24■□□□□ 0.03
CNIH4Q9P003 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 LINC00554-201ENST00000564841 3011 ntBASIC15.24■□□□□ 0.03
CNIH4Q9P003 TSPY26P-202ENST00000565928 3884 ntBASIC15.24■□□□□ 0.03
CNIH4Q9P003 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 KRT18P34-201ENST00000488218 1270 ntBASIC15.24■□□□□ 0.03
CNIH4Q9P003 AC079140.1-201ENST00000508039 487 ntBASIC15.24■□□□□ 0.03
CNIH4Q9P003 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 KRT8P48-201ENST00000515599 1220 ntBASIC15.24■□□□□ 0.03
CNIH4Q9P003 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 KRT8P23-201ENST00000560090 1207 ntBASIC15.24■□□□□ 0.03
CNIH4Q9P003 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CNIH4Q9P003 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH4Q9P003 AC105917.1-201ENST00000506637 2539 ntBASIC15.23■□□□□ 0.03
CNIH4Q9P003 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 GGT4P-201ENST00000623672 1708 ntBASIC15.23■□□□□ 0.03
CNIH4Q9P003 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 AL592309.1-201ENST00000443127 649 ntBASIC15.23■□□□□ 0.03
CNIH4Q9P003 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNIH4Q9P003 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.23■□□□□ 0.03
CNIH4Q9P003 AC243562.1-201ENST00000560672 389 ntBASIC15.23■□□□□ 0.03
CNIH4Q9P003 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms