Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 AC008677.1-201ENST00000519230 1561 ntBASIC17.3■□□□□ 0.36
CISHQ9NSE2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.3■□□□□ 0.36
CISHQ9NSE2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 AL512356.2-201ENST00000546955 174 ntBASIC17.29■□□□□ 0.36
CISHQ9NSE2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 CDC14C-201ENST00000428251 1719 ntBASIC17.29■□□□□ 0.36
CISHQ9NSE2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 AC069224.1-201ENST00000566372 1715 ntBASIC17.29■□□□□ 0.36
CISHQ9NSE2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.29■□□□□ 0.36
CISHQ9NSE2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CISHQ9NSE2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 AC010491.1-201ENST00000563101 2797 ntBASIC17.28■□□□□ 0.36
CISHQ9NSE2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.28■□□□□ 0.36
CISHQ9NSE2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
CISHQ9NSE2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.28■□□□□ 0.36
CISHQ9NSE2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CISHQ9NSE2 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.28■□□□□ 0.36
CISHQ9NSE2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.28■□□□□ 0.36
CISHQ9NSE2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CISHQ9NSE2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 LINC02447-202ENST00000501888 2146 ntBASIC17.28■□□□□ 0.36
CISHQ9NSE2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.28■□□□□ 0.36
CISHQ9NSE2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CISHQ9NSE2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CISHQ9NSE2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.27■□□□□ 0.36
CISHQ9NSE2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CISHQ9NSE2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 AL353705.2-201ENST00000428243 662 ntBASIC17.27■□□□□ 0.36
CISHQ9NSE2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.27■□□□□ 0.36
CISHQ9NSE2 MIR4453-201ENST00000584019 89 ntBASIC17.27■□□□□ 0.36
CISHQ9NSE2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.27■□□□□ 0.36
CISHQ9NSE2 AC003101.2-201ENST00000612557 442 ntBASIC17.27■□□□□ 0.36
CISHQ9NSE2 MIR6080-201ENST00000617359 66 ntBASIC17.27■□□□□ 0.36
CISHQ9NSE2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.27■□□□□ 0.36
CISHQ9NSE2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CISHQ9NSE2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.27■□□□□ 0.36
CISHQ9NSE2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms