Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 SSR4P1-203ENST00000599569 2260 ntBASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 RNU1-129P-201ENST00000384064 167 ntBASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 HAUS4P1-201ENST00000406739 1145 ntBASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 RPS2P1-201ENST00000434010 821 ntBASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 AF238378.1-201ENST00000526806 358 ntBASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 U1.21-201ENST00000580816 167 ntBASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 AC020658.6-201ENST00000623564 1870 ntBASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE2Q9NRR3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 AC023157.3-201ENST00000619086 2088 ntBASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 AKR1C7P-201ENST00000305623 895 ntBASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms