Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AKR1B10P2-201ENST00000577332 927 ntBASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AC006486.2-201ENST00000624246 2199 ntBASIC19.34■□□□□ 0.69
RTN4Q9NQC3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 AC004817.3-201ENST00000602957 2129 ntBASIC19.34■□□□□ 0.69
RTN4Q9NQC3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 LINC02012-201ENST00000608206 1725 ntBASIC19.34■□□□□ 0.69
RTN4Q9NQC3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN4Q9NQC3 LINC01311-201ENST00000565162 1445 ntBASIC19.34■□□□□ 0.69
RTN4Q9NQC3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 KRT18P22-201ENST00000402024 1347 ntBASIC19.33■□□□□ 0.69
RTN4Q9NQC3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN4Q9NQC3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 HLA-F-220ENST00000434407 884 ntBASIC19.33■□□□□ 0.68
RTN4Q9NQC3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 AL023973.1-201ENST00000624619 620 ntBASIC19.33■□□□□ 0.68
RTN4Q9NQC3 CFTRP2-201ENST00000634304 199 ntBASIC19.33■□□□□ 0.68
RTN4Q9NQC3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 HLA-A-202ENST00000376806 1854 ntBASIC19.33■□□□□ 0.68
RTN4Q9NQC3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN4Q9NQC3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 TSPY12P-201ENST00000421279 868 ntBASIC19.32■□□□□ 0.68
RTN4Q9NQC3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTN4Q9NQC3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms