Protein–RNA interactions for Protein: Q9NP55

BPIFA1, BPI fold-containing family A member 1, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA1Q9NP55 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BPIFA1Q9NP55 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 RBPMS2P1-201ENST00000437762 623 ntBASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 RNA5SP410-201ENST00000516285 106 ntBASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 AC027612.4-201ENST00000605371 583 ntBASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BPIFA1Q9NP55 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AC023141.5-201ENST00000458585 616 ntBASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AP001160.2-201ENST00000596071 487 ntBASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AC006538.3-201ENST00000612495 578 ntBASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AC079781.4-201ENST00000641908 219 ntBASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 AP3S2-216ENST00000617003 1561 ntBASIC16.28■□□□□ 0.2
BPIFA1Q9NP55 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms