Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 AL357373.1-201ENST00000394974 322 ntBASIC14.78□□□□□ -0.04
CHD8Q9HCK8 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 HLA-DPA2-205ENST00000433582 733 ntBASIC14.78□□□□□ -0.04
CHD8Q9HCK8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 PIN4P1-201ENST00000451079 396 ntBASIC14.78□□□□□ -0.04
CHD8Q9HCK8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 ALG1L13P-202ENST00000519320 584 ntBASIC14.78□□□□□ -0.04
CHD8Q9HCK8 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 LINC01451-201ENST00000623792 534 ntBASIC14.78□□□□□ -0.04
CHD8Q9HCK8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 AL133267.1-201ENST00000398220 340 ntBASIC14.77□□□□□ -0.04
CHD8Q9HCK8 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 AC019193.1-201ENST00000506678 823 ntBASIC14.77□□□□□ -0.04
CHD8Q9HCK8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.77□□□□□ -0.04
CHD8Q9HCK8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 SNX33P1-201ENST00000592116 1762 ntBASIC14.77□□□□□ -0.05
CHD8Q9HCK8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHD8Q9HCK8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 SLC25A1P3-201ENST00000395415 828 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC053503.3-201ENST00000448375 114 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC026410.1-201ENST00000507366 1101 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC092171.5-201ENST00000608012 942 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 PTPN20CP-201ENST00000614090 920 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC006277.1-201ENST00000624348 1610 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms