Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR3FQ9H1D9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 AC099398.1-201ENST00000567919 2776 ntBASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3FQ9H1D9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AL691432.1-201ENST00000596308 1422 ntBASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 SPDYE17-201ENST00000412399 783 ntBASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 UGT1A2P-201ENST00000454886 866 ntBASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AC004890.2-204ENST00000481968 304 ntBASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AC006449.5-201ENST00000610658 2098 ntBASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AL118508.1-201ENST00000613502 2345 ntBASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3FQ9H1D9 AL596087.1-201ENST00000400979 1969 ntBASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 KRT8P12-202ENST00000472924 1397 ntBASIC17.8■□□□□ 0.44
POLR3FQ9H1D9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms