Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHACTR1Q9C0D0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 RNPS1P1-201ENST00000507437 918 ntBASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 AC004790.2-201ENST00000623588 572 ntBASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHACTR1Q9C0D0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 AL109954.1-202ENST00000564051 2148 ntBASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PHACTR1Q9C0D0 MIR4321-201ENST00000592276 80 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms