Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 AL592424.1-201ENST00000563624 1536 ntBASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 INTS4P2-202ENST00000614726 2019 ntBASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 AC134915.1-201ENST00000426461 574 ntBASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 POU5F1P6-201ENST00000466990 990 ntBASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 CLUHP6-201ENST00000580789 941 ntBASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.48■□□□□ 0.71
RTFDC1Q9BY42 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 FAM21FP-201ENST00000426241 1131 ntBASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 AC108725.1-201ENST00000495472 409 ntBASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RTFDC1Q9BY42 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms