Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 SPDYE22P-201ENST00000582158 798 ntBASIC18.86■□□□□ 0.61
SLF1Q9BQI6 AC026979.3-201ENST00000607315 403 ntBASIC18.86■□□□□ 0.61
SLF1Q9BQI6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLF1Q9BQI6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AP005018.1-201ENST00000525475 301 ntBASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AL662799.1-202ENST00000614205 422 ntBASIC18.85■□□□□ 0.61
SLF1Q9BQI6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
SLF1Q9BQI6 AC046158.3-201ENST00000624947 2558 ntBASIC18.85■□□□□ 0.61
SLF1Q9BQI6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 CICP6-201ENST00000457191 2729 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 AC092171.3-201ENST00000610122 2651 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 RN7SL618P-201ENST00000477850 296 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 ZNF890P-202ENST00000530367 1156 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 AC027307.3-201ENST00000594262 1100 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 AC004840.1-201ENST00000636359 365 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 GGT3P-204ENST00000453783 1664 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 AC008741.2-201ENST00000612792 3115 ntBASIC18.84■□□□□ 0.61
SLF1Q9BQI6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLF1Q9BQI6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 LINC01144-201ENST00000626198 1710 ntBASIC18.83■□□□□ 0.61
SLF1Q9BQI6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLF1Q9BQI6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms