Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 TNRC18P2-201ENST00000417666 2714 ntBASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 PTCHD3P3-201ENST00000403073 906 ntBASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 AL732292.2-201ENST00000609649 430 ntBASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 AC004706.3-202ENST00000621574 984 ntBASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 AL358472.4-201ENST00000633140 710 ntBASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 AL353732.1-201ENST00000569618 1459 ntBASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMSS1Q9BQ75 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 PMS2P1-201ENST00000431037 1228 ntBASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 FOSL1P1-201ENST00000511041 816 ntBASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 AC087641.1-201ENST00000557561 1021 ntBASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMSS1Q9BQ75 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms