Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.48□□□□□ -0.25
S1PR3Q99500 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.48□□□□□ -0.25
S1PR3Q99500 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.48□□□□□ -0.25
S1PR3Q99500 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.48□□□□□ -0.25
S1PR3Q99500 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.47□□□□□ -0.25
S1PR3Q99500 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 AL162727.3-201ENST00000635661 2787 ntBASIC13.47□□□□□ -0.25
S1PR3Q99500 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
S1PR3Q99500 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
S1PR3Q99500 AL022342.1-201ENST00000400363 863 ntBASIC13.47□□□□□ -0.25
S1PR3Q99500 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.47□□□□□ -0.25
S1PR3Q99500 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 HCG4B-203ENST00000450128 991 ntBASIC13.47□□□□□ -0.25
S1PR3Q99500 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
S1PR3Q99500 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.47□□□□□ -0.25
S1PR3Q99500 AC096734.2-201ENST00000562054 433 ntBASIC13.47□□□□□ -0.25
S1PR3Q99500 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.47□□□□□ -0.25
S1PR3Q99500 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
S1PR3Q99500 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
S1PR3Q99500 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
S1PR3Q99500 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.47□□□□□ -0.25
S1PR3Q99500 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
S1PR3Q99500 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.46□□□□□ -0.25
S1PR3Q99500 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
S1PR3Q99500 U82695.1-201ENST00000635752 1889 ntBASIC13.46□□□□□ -0.25
S1PR3Q99500 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
S1PR3Q99500 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.46□□□□□ -0.25
S1PR3Q99500 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.46□□□□□ -0.25
S1PR3Q99500 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 PAUPAR-201ENST00000630360 2965 ntBASIC13.46□□□□□ -0.25
S1PR3Q99500 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
S1PR3Q99500 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
S1PR3Q99500 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
S1PR3Q99500 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.46□□□□□ -0.25
S1PR3Q99500 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 AC007967.2-201ENST00000432613 625 ntBASIC13.46□□□□□ -0.25
S1PR3Q99500 AL591424.1-201ENST00000442569 1213 ntBASIC13.46□□□□□ -0.25
S1PR3Q99500 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
S1PR3Q99500 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.46□□□□□ -0.25
S1PR3Q99500 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
S1PR3Q99500 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.46□□□□□ -0.25
S1PR3Q99500 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms