Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 AC022144.1-201ENST00000602255 1580 ntBASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 FO393414.2-201ENST00000405153 598 ntBASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 MIR4745-201ENST00000577608 62 ntBASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 CYP4F24P-201ENST00000586049 1580 ntBASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP1Q96SZ6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AP001282.1-201ENST00000531301 1499 ntBASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AL691432.1-201ENST00000596308 1422 ntBASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AC006449.6-201ENST00000612330 2296 ntBASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 HAUS4P1-201ENST00000406739 1145 ntBASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AC009118.2-201ENST00000613275 655 ntBASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 BTBD7P1-201ENST00000447253 1453 ntBASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP1Q96SZ6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 TSPY16P-201ENST00000449843 468 ntBASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 AC009477.1-201ENST00000452936 217 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms