Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 AC018529.1-201ENST00000613063 361 ntBASIC16.82■□□□□ 0.28
HAPLN3Q96S86 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 AC092183.1-201ENST00000469884 875 ntBASIC16.81■□□□□ 0.28
HAPLN3Q96S86 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 AC109322.1-201ENST00000524499 1264 ntBASIC16.81■□□□□ 0.28
HAPLN3Q96S86 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 AC022188.1-201ENST00000620960 1664 ntBASIC16.81■□□□□ 0.28
HAPLN3Q96S86 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.81■□□□□ 0.28
HAPLN3Q96S86 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 MIR648-201ENST00000385046 94 ntBASIC16.8■□□□□ 0.28
HAPLN3Q96S86 SPDYE7P-202ENST00000420373 878 ntBASIC16.8■□□□□ 0.28
HAPLN3Q96S86 AC069262.1-201ENST00000539058 672 ntBASIC16.8■□□□□ 0.28
HAPLN3Q96S86 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 AC025678.2-201ENST00000562061 970 ntBASIC16.8■□□□□ 0.28
HAPLN3Q96S86 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
HAPLN3Q96S86 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 HYMAI-201ENST00000635591 3347 ntBASIC16.79■□□□□ 0.28
HAPLN3Q96S86 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 KRT18P28-201ENST00000453838 1332 ntBASIC16.79■□□□□ 0.28
HAPLN3Q96S86 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms