Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 POM121L3P-201ENST00000419331 1163 ntBASIC13.24□□□□□ -0.29
RAB40CQ96S21 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 TSSC2-201ENST00000450217 709 ntBASIC13.24□□□□□ -0.29
RAB40CQ96S21 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 AF228730.7-201ENST00000641842 219 ntBASIC13.24□□□□□ -0.29
RAB40CQ96S21 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AL353732.1-201ENST00000569618 1459 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AC087481.3-201ENST00000602886 1894 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 KRT18P1-202ENST00000452408 1331 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AC005622.1-201ENST00000636801 1703 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 KRT17P6-201ENST00000453795 1220 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AC087641.1-201ENST00000557561 1021 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 NSUN5P1-202ENST00000421140 1535 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 NSUN5P2-203ENST00000457352 1529 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 U82695.1-201ENST00000635752 1889 ntBASIC13.23□□□□□ -0.29
RAB40CQ96S21 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB40CQ96S21 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB40CQ96S21 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms