Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 DUX4L27-201ENST00000554796 1261 ntBASIC16.73■□□□□ 0.27
RPRD1AQ96P16 AC140878.1-201ENST00000565277 250 ntBASIC16.73■□□□□ 0.27
RPRD1AQ96P16 AC105021.1-202ENST00000570572 669 ntBASIC16.73■□□□□ 0.27
RPRD1AQ96P16 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 MIR943-201ENST00000401286 94 ntBASIC16.72■□□□□ 0.27
RPRD1AQ96P16 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 MTND6P24-201ENST00000440466 518 ntBASIC16.72■□□□□ 0.27
RPRD1AQ96P16 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 AC069120.2-201ENST00000524091 540 ntBASIC16.72■□□□□ 0.27
RPRD1AQ96P16 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 AL035456.1-201ENST00000456064 1369 ntBASIC16.72■□□□□ 0.27
RPRD1AQ96P16 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPRD1AQ96P16 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPRD1AQ96P16 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms