Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
FGD4Q96M96 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FGD4Q96M96 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 UBALD1-205ENST00000590891 2641 ntBASIC18.3■□□□□ 0.52
FGD4Q96M96 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.3■□□□□ 0.52
FGD4Q96M96 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
FGD4Q96M96 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.3■□□□□ 0.52
FGD4Q96M96 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.3■□□□□ 0.52
FGD4Q96M96 AC112492.5-201ENST00000421897 457 ntBASIC18.3■□□□□ 0.52
FGD4Q96M96 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.3■□□□□ 0.52
FGD4Q96M96 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 ACA64.2-201ENST00000459014 129 ntBASIC18.3■□□□□ 0.52
FGD4Q96M96 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.3■□□□□ 0.52
FGD4Q96M96 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.3■□□□□ 0.52
FGD4Q96M96 AL391069.4-201ENST00000609583 481 ntBASIC18.3■□□□□ 0.52
FGD4Q96M96 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.3■□□□□ 0.52
FGD4Q96M96 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
FGD4Q96M96 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
FGD4Q96M96 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
FGD4Q96M96 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FGD4Q96M96 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FGD4Q96M96 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FGD4Q96M96 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.29■□□□□ 0.52
FGD4Q96M96 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.29■□□□□ 0.52
FGD4Q96M96 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.29■□□□□ 0.52
FGD4Q96M96 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.29■□□□□ 0.52
FGD4Q96M96 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.29■□□□□ 0.52
FGD4Q96M96 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.29■□□□□ 0.52
FGD4Q96M96 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
FGD4Q96M96 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
FGD4Q96M96 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.29■□□□□ 0.52
FGD4Q96M96 AL365330.1-201ENST00000607459 531 ntBASIC18.29■□□□□ 0.52
FGD4Q96M96 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 AC084018.2-201ENST00000613093 2607 ntBASIC18.29■□□□□ 0.52
FGD4Q96M96 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
FGD4Q96M96 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FGD4Q96M96 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FGD4Q96M96 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.28■□□□□ 0.52
FGD4Q96M96 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.28■□□□□ 0.52
FGD4Q96M96 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
FGD4Q96M96 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.28■□□□□ 0.52
FGD4Q96M96 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
FGD4Q96M96 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.28■□□□□ 0.52
FGD4Q96M96 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 FO393414.2-201ENST00000405153 598 ntBASIC18.28■□□□□ 0.52
FGD4Q96M96 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.28■□□□□ 0.52
FGD4Q96M96 MEP1AP4-201ENST00000423244 1087 ntBASIC18.28■□□□□ 0.52
FGD4Q96M96 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.28■□□□□ 0.52
FGD4Q96M96 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FGD4Q96M96 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.28■□□□□ 0.52
FGD4Q96M96 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms