Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 PCDH8P1-201ENST00000428983 2773 ntBASIC17.16■□□□□ 0.34
ATP2A3Q93084 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ATP2A3Q93084 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A3Q93084 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.15■□□□□ 0.34
ATP2A3Q93084 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 AL138918.1-201ENST00000568306 659 ntBASIC17.15■□□□□ 0.34
ATP2A3Q93084 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A3Q93084 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A3Q93084 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATP2A3Q93084 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 AL645728.1-201ENST00000366221 2101 ntBASIC17.14■□□□□ 0.33
ATP2A3Q93084 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 AL512638.1-201ENST00000457493 794 ntBASIC17.14■□□□□ 0.33
ATP2A3Q93084 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ATP2A3Q93084 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP2A3Q93084 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 AC006449.5-201ENST00000610658 2098 ntBASIC17.13■□□□□ 0.33
ATP2A3Q93084 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms