Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AC105129.2-201ENST00000559536 390 ntBASIC27.65■■■□□ 2.02
TRIM41Q8WV44 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 AC007967.4-201ENST00000614700 386 ntBASIC27.65■■■□□ 2.02
TRIM41Q8WV44 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC27.65■■■□□ 2.02
TRIM41Q8WV44 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
TRIM41Q8WV44 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AC005622.1-201ENST00000636801 1703 ntBASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AC007389.4-201ENST00000454674 793 ntBASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 RNA5SP410-201ENST00000516285 106 ntBASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AC090340.1-201ENST00000620778 4980 ntBASIC27.64■■■□□ 2.02
TRIM41Q8WV44 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRIM41Q8WV44 AC005052.1-201ENST00000625181 2492 ntBASIC27.64■■■□□ 2.01
TRIM41Q8WV44 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC27.64■■■□□ 2.01
TRIM41Q8WV44 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TRIM41Q8WV44 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.01
TRIM41Q8WV44 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 SPDYE19P-201ENST00000338590 713 ntBASIC27.63■■■□□ 2.01
TRIM41Q8WV44 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 AC099336.1-201ENST00000417053 1171 ntBASIC27.63■■■□□ 2.01
TRIM41Q8WV44 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 CTBP2P5-201ENST00000454986 1264 ntBASIC27.63■■■□□ 2.01
TRIM41Q8WV44 BANF1P1-201ENST00000553684 263 ntBASIC27.63■■■□□ 2.01
TRIM41Q8WV44 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 LTB4R2-202ENST00000528054 3092 ntBASIC27.63■■■□□ 2.01
TRIM41Q8WV44 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TRIM41Q8WV44 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 OSM-203ENST00000403463 464 ntTSL 3 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 KRT8P13-201ENST00000463294 1010 ntBASIC27.62■■■□□ 2.01
TRIM41Q8WV44 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC27.62■■■□□ 2.01
TRIM41Q8WV44 ALOX12P2-203ENST00000570921 1945 ntBASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms