Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 VDAC1P7-201ENST00000462417 847 ntBASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 AC132192.2-201ENST00000596206 1147 ntBASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRUNE2Q8WUY3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 C1QBPP1-201ENST00000400117 770 ntBASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AC093433.1-201ENST00000458048 571 ntBASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AL138709.1-201ENST00000614840 1693 ntBASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 PGAM1P5-201ENST00000548011 764 ntBASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 EIF5AP2-201ENST00000585668 1047 ntBASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AC018470.1-201ENST00000624790 3129 ntBASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRUNE2Q8WUY3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC026316.1-201ENST00000398900 414 ntBASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC018892.3-201ENST00000623986 2499 ntBASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC018695.7-201ENST00000624587 2492 ntBASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC005052.1-201ENST00000625181 2492 ntBASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AC145423.3-201ENST00000615987 467 ntBASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.6■□□□□ 0.25
PRUNE2Q8WUY3 AL023775.1-201ENST00000454907 1746 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms