Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 AL592424.1-201ENST00000563624 1536 ntBASIC19.46■□□□□ 0.71
SNED1Q8TER0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 C1QBPP1-201ENST00000400117 770 ntBASIC19.45■□□□□ 0.7
SNED1Q8TER0 CNN2P8-201ENST00000421872 913 ntBASIC19.45■□□□□ 0.7
SNED1Q8TER0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 AC243562.2-201ENST00000561247 970 ntBASIC19.45■□□□□ 0.7
SNED1Q8TER0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
SNED1Q8TER0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 REXO1L8P-201ENST00000604378 1897 ntBASIC19.45■□□□□ 0.7
SNED1Q8TER0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNED1Q8TER0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AC009053.2-201ENST00000563701 2365 ntBASIC19.44■□□□□ 0.7
SNED1Q8TER0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AC022137.2-201ENST00000503482 481 ntBASIC19.44■□□□□ 0.7
SNED1Q8TER0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 AC012313.1-201ENST00000593393 3059 ntBASIC19.44■□□□□ 0.7
SNED1Q8TER0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 FZD10-202ENST00000539839 3282 ntBASIC19.44■□□□□ 0.7
SNED1Q8TER0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNED1Q8TER0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNED1Q8TER0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.43■□□□□ 0.7
SNED1Q8TER0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 PFN1P12-201ENST00000455938 534 ntBASIC19.43■□□□□ 0.7
SNED1Q8TER0 AC093433.1-201ENST00000458048 571 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms