Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC134407.2-201ENST00000625089 1978 ntBASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 AL662844.4-201ENST00000606367 2838 ntBASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 AC015922.1-201ENST00000421102 1152 ntBASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 CRB3P1-201ENST00000449338 276 ntBASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD1Q8NHV4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 AL596087.1-201ENST00000400979 1969 ntBASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 Z97205.2-201ENST00000564697 1639 ntBASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 GNAQP1-201ENST00000444815 1067 ntBASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 SPDYE22P-201ENST00000582158 798 ntBASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 SRD5A3P1-201ENST00000603021 949 ntBASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 AC074044.1-201ENST00000609673 707 ntBASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD1Q8NHV4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.78■□□□□ 0.6
NEDD1Q8NHV4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms