Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 DOC2GP-204ENST00000639052 2548 ntBASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT1Q8NF37 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 AP3S2-216ENST00000617003 1561 ntBASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 GPS2P2-201ENST00000430745 888 ntBASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 ALG1L8P-201ENST00000533887 760 ntBASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 AL365330.1-201ENST00000607459 531 ntBASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT1Q8NF37 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.39■□□□□ 0.22
LPCAT1Q8NF37 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LPCAT1Q8NF37 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.39■□□□□ 0.22
LPCAT1Q8NF37 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.39■□□□□ 0.22
LPCAT1Q8NF37 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LPCAT1Q8NF37 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
LPCAT1Q8NF37 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 FAM220BP-201ENST00000377689 816 ntBASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 RARRES2P9-201ENST00000565168 469 ntBASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT1Q8NF37 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT1Q8NF37 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT1Q8NF37 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT1Q8NF37 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LPCAT1Q8NF37 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LPCAT1Q8NF37 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
LPCAT1Q8NF37 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms