Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNAAF1Q8NEP3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC025062.2-201ENST00000605477 670 ntBASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC107918.4-202ENST00000641623 219 ntBASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AC131009.4-201ENST00000624048 1740 ntBASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.37□□□□□ -0.11
DNAAF1Q8NEP3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 LINC01144-201ENST00000626198 1710 ntBASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 POU5F1P6-201ENST00000466990 990 ntBASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 AC021087.4-201ENST00000563761 564 ntBASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 FAM45BP-202ENST00000592932 1624 ntBASIC14.36□□□□□ -0.11
DNAAF1Q8NEP3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms