Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 RPSAP43-201ENST00000402237 625 ntBASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 KRT8P48-201ENST00000515599 1220 ntBASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 AC092865.5-201ENST00000545435 363 ntBASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 FLJ16779-201ENST00000612722 7638 ntBASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 MIR346-201ENST00000362234 95 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 SPCS2P4-201ENST00000436160 681 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AL592309.1-201ENST00000443127 649 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AC112482.1-201ENST00000492080 688 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AL138918.1-201ENST00000568306 659 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 MIR4469-201ENST00000583919 79 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AC010327.4-202ENST00000591484 748 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AC105339.1-204ENST00000636249 355 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 DOC2GP-204ENST00000639052 2548 ntBASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
SRFBP1Q8NEF9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SRFBP1Q8NEF9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms