Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 CNN2P10-201ENST00000443067 918 ntBASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AC068587.10-201ENST00000641210 219 ntBASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 YBX1P6-201ENST00000442962 1002 ntBASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 MIR3615-201ENST00000581999 87 ntBASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AC093813.1-201ENST00000605066 256 ntBASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL27A1Q8IZC6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 HAUS4P1-201ENST00000406739 1145 ntBASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 AC078819.1-201ENST00000547454 765 ntBASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 AC012085.1-201ENST00000548270 765 ntBASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL27A1Q8IZC6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL27A1Q8IZC6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COL27A1Q8IZC6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL27A1Q8IZC6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL27A1Q8IZC6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 ACTBP8-201ENST00000403258 1108 ntBASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 PFN1P12-201ENST00000455938 534 ntBASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 GAPDHP40-201ENST00000505218 1006 ntBASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms