Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.21■□□□□ 0.19
APLFQ8IW19 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.21■□□□□ 0.19
APLFQ8IW19 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
APLFQ8IW19 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.21■□□□□ 0.19
APLFQ8IW19 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.21■□□□□ 0.19
APLFQ8IW19 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
APLFQ8IW19 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.21■□□□□ 0.19
APLFQ8IW19 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
APLFQ8IW19 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.21■□□□□ 0.19
APLFQ8IW19 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
APLFQ8IW19 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.21■□□□□ 0.19
APLFQ8IW19 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.21■□□□□ 0.19
APLFQ8IW19 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.21■□□□□ 0.19
APLFQ8IW19 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.21■□□□□ 0.19
APLFQ8IW19 AC010654.1-201ENST00000615722 808 ntBASIC16.21■□□□□ 0.19
APLFQ8IW19 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.21■□□□□ 0.19
APLFQ8IW19 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.21■□□□□ 0.19
APLFQ8IW19 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.21■□□□□ 0.19
APLFQ8IW19 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
APLFQ8IW19 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
APLFQ8IW19 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.21■□□□□ 0.18
APLFQ8IW19 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
APLFQ8IW19 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
APLFQ8IW19 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
APLFQ8IW19 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.21■□□□□ 0.18
APLFQ8IW19 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.21■□□□□ 0.18
APLFQ8IW19 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
APLFQ8IW19 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
APLFQ8IW19 AL359258.3-201ENST00000622910 2331 ntBASIC16.2■□□□□ 0.18
APLFQ8IW19 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 AC004790.2-201ENST00000623588 572 ntBASIC16.2■□□□□ 0.18
APLFQ8IW19 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
APLFQ8IW19 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
APLFQ8IW19 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.2■□□□□ 0.18
APLFQ8IW19 AC026748.1-201ENST00000624349 3251 ntBASIC16.2■□□□□ 0.18
APLFQ8IW19 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APLFQ8IW19 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.19■□□□□ 0.18
APLFQ8IW19 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 ELL2P1-201ENST00000413990 1906 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
APLFQ8IW19 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 GPR89P-201ENST00000407924 1495 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms